AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site E34D
Virus Norovirus
Mutation level Amino acid level
Gene/protein/region type ORF3
Gene ID 1491971
Country Japan
Mutation type nonsynonymous mutation
Genotype/subtype/clade GII.4
Sample Human
Variants -
Viral reference sequence X86557.1
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Protein VP2
Uniprot protein ID Q83885
Protein length 212 amino acids
Protein description The ORF3 encodes the minor capsid protein VP2, minor structural protein present in one or two copies per virion. VP2 stabilizes capsid protein VP1 by protecting it from disassembly and degradation. VP2 may play a role in RNA genome packaging.

Literature information:


Pubmed ID 18768979
Clinical information No
Disease -
Published year 2008
Journal Journal of Virology
Title Identification of monomorphic and divergent haplotypes in the 2006-2007 norovirus GII/4 epidemic population by genomewide tracing of evolutionary history
Author Kazushi Motomura, Tomoichiro Oka, Masaru Yokoyama, Hiromi Nakamura, Hiromi Mori
Evidence FIG.4