AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site D614G
Virus SARS-CoV-2
Mutation level Amino acid level
Gene/protein/region type S
Gene ID 43740568
Country Belgium,France,China,Germany,Netherlands,Brazil,Canada,Italy,Australia,Japan,Japan,USA,Spain
Mutation type nonsynonymous mutation
Genotype/subtype/clade 20H/20J
Sample Human
Variants Beta/Gamma
Viral reference sequence MN908947.3
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Spike glycoprotein
Uniprot protein ID P0DTC2
Protein length 1273 amino acids
Protein description Spike protein is one of the structural proteins of SARS-CoV-2. The monomeric protein consists of one large ectodomain, a single-pass transmembrane anchor, and a short intracellular tail at C-terminus. It encompasses 22 glycosylation sites. S protein cleaves into two subunits namely S1 and S2 following receptor recognition. Receptor Binding Domain (RBD) in S1 subunit plays a major role in ACE2 receptor binding.

Literature information:


Pubmed ID 32374903
Clinical information No
Disease -
Published year 2020
Journal INTERNATIONAL JOURNAL OF CLINICAL PRACTICE
Title SARS-CoV-2 viral spike G614 mutation exhibits higher case fatality rate
Author Manuel Becerra-Flores,Timothy Cardozo
Evidence The major mutation detected to date in the SARS-CoV-2 viral envelope spike protein, which is responsible for virus attachment to the host and is also the main target for host antibodies, is a mutation of an aspartate (D) at position 614 found frequently in Chinese strains to a glycine (G)