AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site F377L
Virus SARS-CoV-2
Mutation level Amino acid level
Gene/protein/region type S
Gene ID 43740568
Country -
Mutation type nonsynonymous mutation
Genotype/subtype/clade -
Sample cell line
Variants -
Viral reference sequence QHD43416.1
Drug/antibody/vaccine VHH UVW_NAb-resistant
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation Yes
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Spike glycoprotein
Uniprot protein ID P0DTC2
Protein length 1273 amino acids
Protein description Spike protein is one of the structural proteins of SARS-CoV-2. The monomeric protein consists of one large ectodomain, a single-pass transmembrane anchor, and a short intracellular tail at C-terminus. It encompasses 22 glycosylation sites. S protein cleaves into two subunits namely S1 and S2 following receptor recognition. Receptor Binding Domain (RBD) in S1 subunit plays a major role in ACE2 receptor binding.

Literature information:


Pubmed ID 33436526
Clinical information No
Disease -
Published year 2021
Journal Science
Title Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Author Paul-Albert Koenig, Hrishikesh Das, Hejun Liu, Beate M. Kummerer, Florian N. Gohr
Evidence Particularly prominent were escape mutations F490S or S494P in the VHH E interface, as well as S371P and K378Q in the UVW interface, which are expected to compromise the structurally defined VHH-RBD interface (see extended results in the supplementary materials). We identified further mutations in interfaces E (G447S, Y449H/D/N, L452R, F490S, S494P/S, G496S, and Y508H) and UVW (Y369H, S371P, F374I/V, T376I, F377L, and K378Q/N) in this and a separate evolution experiment (tables S5 to S8)