AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site 22928T>A
Virus SARS-CoV
Mutation level Nucleotide level
Gene/protein/region type S Protein
Gene ID 1489668
Country China
Mutation type -
Genotype/subtype/clade -
Sample Human
Variants -
Viral reference sequence AY390556.1
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name spike glycoprotein
Uniprot protein ID P59594
Protein length 1255 amino acids
Protein description The spike protein of SARS coronaviruses is a protein composed of three polypeptide chains and it contains two domains, S1 and S2. The S1 domain binds the host cell receptors, while the S2 domain is responsible for the fusion of the virus with the host cell membrane. Between S1 and S2, there is a hinge region which is targeted by the host cell proteases.

Literature information:


Pubmed ID 14752165
Clinical information No
Disease -
Published year 2004
Journal Science
Title Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China
Author Chinese SARS Molecular Epidemiology Consortium
Evidence Table s2