AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site K417V
Virus SARS-CoV-2
Mutation level Amino acid level
Gene/protein/region type S
Gene ID 43740568
Country -
Mutation type nonsynonymous mutation
Genotype/subtype/clade -
Sample cell line
Variants -
Viral reference sequence MN908947.3
Drug/antibody/vaccine REGN10933/Casirivimab-resistant,mAb_S2D25-resistant,mAb_S2D8-resistant,mAb_S2D91-resistant,mAb_S2H14-resistant,mAb_S2H30-resistant,mAb_S2H7-resistant,mAb_S2H74-resistant,mAb_S2K8-resistant,mAb_S2X128-resistant,mAb_S2X193-resistant,mAb_S2X21-resistant,mAb_
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation Yes
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Spike glycoprotein
Uniprot protein ID P0DTC2
Protein length 1273 amino acids
Protein description Spike protein is one of the structural proteins of SARS-CoV-2. The monomeric protein consists of one large ectodomain, a single-pass transmembrane anchor, and a short intracellular tail at C-terminus. It encompasses 22 glycosylation sites. S protein cleaves into two subunits namely S1 and S2 following receptor recognition. Receptor Binding Domain (RBD) in S1 subunit plays a major role in ACE2 receptor binding.

Literature information:


Pubmed ID 33621484
Clinical information No
Disease -
Published year 2021
Journal Cell
Title Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
Author Emma C Thomson, Laura E Rosen, James G Shepherd, Roberto Spreafico, Ana da Silva Filipe
Evidence Figure6