Mutation detail:
| Mutation site | 5917C>T |
| Virus | MERS-CoV |
Mutation level  |
Nucleotide level |
| Gene/protein/region type | ORF1ab(nsp3) |
| Gene ID | 14254602 |
| Country | Korea |
| Mutation type |
- |
| Genotype/subtype/clade | - |
| Sample |
Human |
| Variants | - |
| Viral reference sequence | NC_019843.3 |
| Drug/antibody/vaccine | - |
| Transmissibility |
- |
| Transmission mechanism | - |
| Pathogenicity |
- |
| Pathogenicity mechanism | - |
| Immune escape mutation | - |
| Immune escape mechanism | - |
| RT-PCR primers probes | - |
Protein detail:
| Protein name | 1AB polyprotein |
| Uniprot protein ID | K9N7C7 |
| Protein length | 7078 amino acids |
| Protein description | ORF1ab, the largest gene, contains overlapping open reading frames that encode polyproteins PP1ab and PP1a. The polyproteins are cleaved to yield 16 nonstructural proteins, NSP1-16. Production of the longer (PP1ab) or shorter protein (PP1a) depends on a -1 ribosomal frameshifting event. The proteins, based on similarity to other coronaviruses, include the papain-like proteinase protein (NSP3), 3C-like proteinase (NSP5), RNA-dependent RNA polymerase (NSP12, RdRp), helicase (NSP13, HEL), endoRNAse (NSP15), 2'-O-Ribose-Methyltransferase (NSP16) and other nonstructural proteins.MERS-CoV nonstructural proteins are responsible for viral transcription, replication, proteolytic processing, suppression of host immune responses and suppression of host gene expression. The RNA-dependent RNA polymerase is a target of antiviral therapies. |
Literature information:
| Pubmed ID | 27900364 |
| Clinical information | Yes |
| Disease | - |
| Published year | 2016 |
| Journal | Cold Spring Harbor Molecular Case Studies |
| Title | Analysis of intrapatient heterogeneity uncovers the microevolution of Middle East respiratory syndrome coronavirus |
| Author | Donghyun Park,Hee Jae Huh,Yeon Jeong Kim,Dae-Soon Son,Hyo-Jeong Jeon |
| Evidence | Table 2 |