AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site k68del
Virus SARS-CoV-2
Mutation level Amino acid level
Gene/protein/region type ORF8
Gene ID 43740577
Country England
Mutation type nonsynonymous mutation
Genotype/subtype/clade -
Sample Human
Variants Alpha
Viral reference sequence NC_045512.2
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name ORF8 protein
Uniprot protein ID -
Protein length 121 amino acids
Protein description -

Literature information:


Pubmed ID 33704818
Clinical information No
Disease -
Published year 2021
Journal JOURNAL OF MEDICAL VIROLOGY
Title Immunoinformatic analysis of structural and epitope variations in the spike and Orf8 proteins of SARS-CoV-2/B.1.1.7
Author Mushtaq Hussain, Sanya Shabbir, Anusha Amanullah, Fozia Raza, Muhammad J Imdad
Evidence Sequence alignment verified the existence of mutations in orf1a/b (T1001I, A1708D, I2230T, S2625X, and delSGF3675-3677), spike (delHV69-70, del144Y, N501Y, A570D, D614G, P681H, T716I, S982A, and D1118H), orf8 (Q27X, R52I, del68K, Y73C, L118V, F120L, and I121F) and N (D3L, R203K, G204R, and S235F) proteins in SARS-CoV-2/B.1.1.7 compared to the SARS-CoV-2/Wuhan (Figures 1 and S1-S5).