AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site A244V
Virus Norovirus
Mutation level Amino acid level
Gene/protein/region type ORF2
Gene ID 1491972
Country Korea
Mutation type nonsynonymous mutation
Genotype/subtype/clade GII.17
Sample Human
Variants -
Viral reference sequence JN699043.1
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Capsid protein VP1
Uniprot protein ID Q83884
Protein length 530 amino acids
Protein description The ORF2 encodes the major capsid protein, VP1, which consists of a shell (S) and two protruding (P) domains, P1 and P2. The S domain is responsible for assembly of VP1, and the P1 domain enhances the stability of virus particles.27,28 The P2 domain, the most exposed surface of the viral particle,27 is involved in interaction with both potential neutralizing antibody and histo-blood group antigens (HBGAs), which are the presumptive initial binding site in establishing human infection.

Literature information:


Pubmed ID 27148739
Clinical information Yes
Disease -
Published year 2016
Journal Plos One
Title Emergence of Norovirus GII.17 Variants among Children with Acute Gastroenteritis in South Korea
Author Hien Dang Thanh , van Thai Than , Tinh Huu Nguyen , Inseok Lim, wonyong Kim
Evidence Fig 4