AVM v1, released 02-OCT-22

A manually curated database of aerosol-transmitted virus mutations, human diseases, and drugs

Mutation detail:


Mutation site H78Y
Virus Human rhinovirus
Mutation level Amino acid level
Gene/protein/region type VP1
Gene ID 1461213
Country -
Mutation type nonsynonymous mutation
Genotype/subtype/clade B
Sample cell line
Variants -
Viral reference sequence NC_001490.1
Drug/antibody/vaccine -
Transmissibility -
Transmission mechanism -
Pathogenicity -
Pathogenicity mechanism -
Immune escape mutation -
Immune escape mechanism -
RT-PCR primers probes -

Protein detail:


Protein name Capsid Protein VP1
Uniprot protein ID P03303
Protein length 289 amino acids
Protein description VP1 forms an icosahedral capsid of pseudo T=3 symmetry with capsid proteins VP2 and VP3. The capsid is 300 Angstroms in diameter, composed of 60 copies of each capsid protein and enclosing the viral positive strand RNA genome. Capsid protein VP1 mainly forms the vertices of the capsid. Capsid protein VP1 interacts with host ICAM1 to provide virion attachment to target host cells.

Literature information:


Pubmed ID 1332036
Clinical information No
Disease -
Published year 1992
Journal Proceedings Of The National Academy Of Sciences Of The United States Of America
Title Acid-induced structural changes in human rhinovirus 15: possible role in uncoating
Author V L Giranda,B A Heinz,M A Oliveira,I Minor,K H Kim,P R Kolatkar,M G Rossmann,R R Rueckert
Evidence Table1